Structural basis of human ghrelin receptor signaling by ghrelin and the synthetic agonist ibutamoren
Liu, H., Sun, D., Myasnikov, A., Damian, M., Baneres, J.L., Sun, J., Zhang, C.(2021) Nat Commun 12: 6410
Experimental Data Snapshot
wwPDB Validation   3D Report Full Report
(2021) Nat Commun 12: 6410
Entity ID: 1 | |||||
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Molecule | Chains | Sequence Length | Organism | Details | Image |
Guanine nucleotide-binding protein G(i) subunit alpha-1 | 354 | Homo sapiens | Mutation(s): 0  Gene Names: GNAI1 EC: 3.6.5 Membrane Entity: Yes  | ||
UniProt & NIH Common Fund Data Resources | |||||
Find proteins for P63096 (Homo sapiens) Explore P63096  Go to UniProtKB:  P63096 | |||||
PHAROS:  P63096 GTEx:  ENSG00000127955  | |||||
Entity Groups   | |||||
Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
UniProt Group | P63096 | ||||
Sequence AnnotationsExpand | |||||
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Entity ID: 2 | |||||
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Molecule | Chains | Sequence Length | Organism | Details | Image |
Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-1 | 340 | Homo sapiens | Mutation(s): 0  Gene Names: GNB1 | ||
UniProt & NIH Common Fund Data Resources | |||||
Find proteins for P62873 (Homo sapiens) Explore P62873  Go to UniProtKB:  P62873 | |||||
PHAROS:  P62873 GTEx:  ENSG00000078369  | |||||
Entity Groups   | |||||
Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
UniProt Group | P62873 | ||||
Sequence AnnotationsExpand | |||||
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Entity ID: 3 | |||||
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Molecule | Chains | Sequence Length | Organism | Details | Image |
Guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-2 | C [auth G] | 71 | Homo sapiens | Mutation(s): 0  Gene Names: GNG2 Membrane Entity: Yes  | |
UniProt & NIH Common Fund Data Resources | |||||
Find proteins for P59768 (Homo sapiens) Explore P59768  Go to UniProtKB:  P59768 | |||||
PHAROS:  P59768 GTEx:  ENSG00000186469  | |||||
Entity Groups   | |||||
Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
UniProt Group | P59768 | ||||
Sequence AnnotationsExpand | |||||
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Entity ID: 4 | |||||
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Molecule | Chains | Sequence Length | Organism | Details | Image |
Antibody fragment | D [auth N] | 246 | Mus musculus | Mutation(s): 0  | |
Entity Groups   | |||||
Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
Sequence AnnotationsExpand | |||||
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Entity ID: 5 | |||||
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Molecule | Chains | Sequence Length | Organism | Details | Image |
Growth hormone secretagogue receptor type 1 | E [auth R] | 366 | Homo sapiens | Mutation(s): 0  Gene Names: GHSR Membrane Entity: Yes  | |
UniProt & NIH Common Fund Data Resources | |||||
Find proteins for Q92847 (Homo sapiens) Explore Q92847  Go to UniProtKB:  Q92847 | |||||
PHAROS:  Q92847 GTEx:  ENSG00000121853  | |||||
Entity Groups   | |||||
Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
UniProt Group | Q92847 | ||||
Sequence AnnotationsExpand | |||||
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Find similar proteins by: Sequence | 3D Structure
Entity ID: 6 | |||||
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Molecule | Chains | Sequence Length | Organism | Details | Image |
Ghrelin-27 | F [auth L] | 12 | Homo sapiens | Mutation(s): 1  Membrane Entity: Yes  | |
UniProt & NIH Common Fund Data Resources | |||||
Find proteins for Q9UBU3 (Homo sapiens) Explore Q9UBU3  Go to UniProtKB:  Q9UBU3 | |||||
PHAROS:  Q9UBU3 GTEx:  ENSG00000157017  | |||||
Entity Groups   | |||||
Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
UniProt Group | Q9UBU3 | ||||
Sequence AnnotationsExpand | |||||
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Ligands 1 Unique | |||||
---|---|---|---|---|---|
ID | Chains | Name / Formula / InChI Key | 2D Diagram | 3D Interactions | |
CLR (Subject of Investigation/LOI) Query on CLR | G [auth R], H [auth R] | CHOLESTEROL C27 H46 O HVYWMOMLDIMFJA-DPAQBDIFSA-N |
Funding Organization | Location | Grant Number |
---|---|---|
National Institutes of Health/National Institute of General Medical Sciences (NIH/NIGMS) | United States | R35GM128641 |
National Institutes of Health/National Institute of General Medical Sciences (NIH/NIGMS) | United States | R03TR003306 |